Publications

Ariano B, Mattiangeli V, Breslin EM, Parkinson EW, McLaughlin TR, Thompson JE, Power RK, Stock JT, Mercieca-Spiteri B, Stoddart S, Malone C, Gopalakrishnan S, Cassidy LM, Bradley DG., Ancient Maltese genomes and the genetic geography of Neolithic Europe, Current Biology, 2022 Journal Article, 2022 DOI

Speidel L., Cassidy L., Davies R.W., Hellenthal G., Skoglund P., Myers S.R., Inferring Population Histories for Ancient Genomes Using Genome-Wide Genealogies, Molecular Biology and Evolution, 38, (9), 2021, p3497 - 3511, p3497-3511 Journal Article, 2021 DOI

Maisano Delser P., Jones E.R., Hovhannisyan A., Cassidy L., Pinhasi R., Manica A., A curated dataset of modern and ancient high-coverage shotgun human genomes, Scientific Data, 8, (1), 2021 Journal Article, 2021 DOI

Cooke, N.P. and Mattiangeli, V. and Cassidy, L.M. and Okazaki, K. and Stokes, C.A. and Onbe, S. and Hatakeyama, S. and Machida, K. and Kasai, K. and Tomioka, N. and Matsumoto, A. and Ito, M. and Kojima, Y. and Bradley, D.G. and Gakuhari, T. and Nakagome, S., Ancient genomics reveals tripartite origins of Japanese populations, Science Advances, 7, (38), 2021 Journal Article, 2021 DOI

Dowd M., Lynch L.G., Cassidy L., Bonsall J., Kahlert T., Reimer P., Svyatko S., OCarroll E., Reilly E., Noonan A., Beglane F., NEOLITHIC ENGAGEMENTS WITH THE DEAD: MORTUARY PROCESSING ON BENGORM MOUNTAIN IN THE NORTH-WEST OF IRELAND, Oxford Journal of Archaeology, 39, (4), 2020, p368 - 394, p368-394 Journal Article, 2020 DOI

Margaryan A, Lawson DJ, Sikora M, Racimo F, Rasmussen S, Moltke I, Cassidy LM, Jørsboe E, Ingason A, Pedersen MW, Korneliussen T, Wilhelmson H, Bu" MM, de Barros Damgaard P, Martiniano R, Renaud G, Bhérer C, Moreno-Mayar JV, Fotakis AK, Allen M, Allmäe R, Molak M, Cappellini E, Scorrano G, McColl H, Buzhilova A, Fox A, Albrechtsen A, Schütz B, Skar B, Arcini C, Falys C, Jonson CH, B"aszczyk D, Pezhemsky D, Turner-Walker G, Gestsdóttir H, Lundstrøm I, Gustin I, Mainland I, Potekhina I, Muntoni IM, Cheng J, Stenderup J, Ma J, Gibson J, Peets J, Gustafsson J, Iversen KH, Simpson L, Strand L, Loe L, Sikora M, Florek M, Vretemark M, Redknap M, Bajka M, Pushkina T, Søvsø M, Grigoreva N, Christensen T, Kastholm O, Uldum O, Favia P, Holck P, Sten S, Arge SV, Ellingvåg S, Moiseyev V, Bogdanowicz W, Magnusson Y, Orlando L, Pentz P, Jessen MD, Pedersen A, Collard M, Bradley DG, Jørkov ML, Arneborg J, Lynnerup N, Price N, Gilbert MTP, Allentoft ME, Bill J, Sindbæk SM, Hedeager L, Kristiansen K, Nielsen R, Werge T, Willerslev E., Population genomics of the Viking world., Nature, 585, (7825), 2020, p390-396 Journal Article, 2020 DOI

Hui R, D'Atanasio E, Cassidy LM, Scheib CL, Kivisild T., Evaluating genotype imputation pipeline for ultra-low coverage ancient genomes., Scientific reports, 10, (1), 2020, p18542 Journal Article, 2020 DOI

Cassidy LM, Maoldúin RÓ, Kador T, Lynch A, Jones C, Woodman PC, Murphy E, Ramsey G, Dowd M, Noonan A, Campbell C, Jones ER, Mattiangeli V, Bradley DG., A dynastic elite in monumental Neolithic society., Nature, 582, (7812), 2020, p384-388 Journal Article, 2020 DOI

Cassidy LM., A steppe in the right direction., Nature ecology & evolution, 3, (6), 2019, p877-878 Journal Article, 2019 DOI

Schroeder, H. and Sikora, M. and Gopalakrishnan, S. and Cassidy, L.M. and Delser, P.M. and Velasco, M.S. and Schraiber, J.G. and Rasmussen, S. and Homburger, J.R. and à vila-Arcos, M.C. and Allentoft, M.E. and Víctor Moreno-Mayar, J. and Renaud, G. and Gómez-Carballa, A. and Laffoon, J.E. and Hopkins, R.J.A. and Higham, T.F.G. and Carr, R.S. and Schaffer, W.C. and Day, J.S. and Hoogland, M. and Salas, A. and Bustamante, C.D. and Nielsen, R. and Bradley, D.G. and Hofman, C.L. and Willerslev, E., Origins and genetic legacies of the Caribbean Taino, Proceedings of the National Academy of Sciences of the United States of America, 115, (10), 2018, p2341-2346 Journal Article, 2018 TARA - Full Text DOI

Kador T., Cassidy L.M., Geber J., Hensey R., Meehan P., Moore S., Rites of Passage: Mortuary Practice, Population Dynamics, and Chronology at the Carrowkeel Passage Tomb Complex, Co. Sligo, Ireland, Proceedings of the Prehistoric Society, 84, 2018, p225 - 255, p225-255 Journal Article, 2018 DOI

Byrne RP, Martiniano R, Cassidy LM, Carrigan M, Hellenthal G, Hardiman O, Bradley DG, McLaughlin RL, Insular Celtic population structure and genomic footprints of migration, PLOS Genetics, 14, 2018, pe1007152 Journal Article, 2018 TARA - Full Text DOI

Lara M. Cassidy, Matthew D. Teasdale, Sean Carolan, Ruth Enright, Raymond Werner, Daniel G. Bradley, Emma K. Finlay, Valeria Mattiangeli, Capturing goats: Documenting two hundred years of mitochondrial DNA diversity among goat populations from Britain and Ireland, Biology Letters, Volume 13, (Issue 3), 2017 Journal Article, 2017 DOI

C Greene, J Kealy, M M Humphries, Y Gong, J Hou, N Hudson, L M Cassidy, R Martiniano, V Shashi, S R Hooper, G A Grant, P F Kenna, K Norris, C K Callaghan, M dN Islam, S M O'Mara, Z Najda, S G Campbell, J S Pachter, J Thomas, N M Williams, P Humphries, K C Murphy, M Campbell, Dose-dependent expression of claudin-5 is a modifying factor in schizophrenia, Molecular Psychiatry, 2017 Journal Article, 2017 DOI

Martiniano R, Cassidy LM, Ó'Maoldúin R, McLaughlin R, Silva NM, Manco L, Fidalgo D, Pereira T, Coelho MJ, Serra M, Burger J, Parreira R, Moran E, Valera AC, Porfirio E, Boaventura R, Silva AM, Bradley DG., The population genomics of archaeological transition in west Iberia: Investigation of ancient substructure using imputation and haplotype-based methods, PLoS Genetics, 13, 2017, pe1006852 Journal Article, 2017 DOI TARA - Full Text

Cassidy L.M, Martiniano R, Murphy E.M, Teasdale M.D, Mallory J, Hartwell B, Bradley D.G, Neolithic and Bronze Age migration to Ireland and establishment of the insular atlantic genome, Proceedings of the National Academy of Sciences of the United States of America, 113, (2), 2016, p368 - 373 Journal Article, 2016 DOI URL

Hofmanová Z, Kreutzer S, Hellenthal G, Sell C, Diekmann Y, Díez-Del-Molino D, Van Dorp L, López S, Kousathanas A, Link V, Kirsanow K, Cassidy L.M, Martiniano R, Strobel M, Scheu A, Kotsakis K, Halstead P, Triantaphyllou S, Kyparissi-Apostolika N, Urem-Kotsou D, Ziota C, Adaktylou F, Gopalan S, Bobo D.M, Winkelbach L, Blöcher J, UnterlÀnder M, Leuenberger C, à ilingiroǧlu C, Horejs B, Gerritsen F, Shennan S.J, Bradley D.G, Currat M, Veeramah K.R, Wegmann D, Thomas M.G, Papageorgopoulou C, Burger J, Early farmers from across Europe directly descended from Neolithic Aegeans, Proceedings of the National Academy of Sciences of the United States of America, 113, (25), 2016, p6886 - 6891 Journal Article, 2016 URL TARA - Full Text DOI

Broushaki F, Thomas M.G, Link I, López S, Van Dorp L, Kirsanow K, Hofmanová Z, Diekmann Y, Cassidy L.M, Díez-Del-Molino D, Kousathanas A, Sell C, Robson H.K, Martiniano R, Blöcher J, Scheu A, Kreutzer S, Bollongino R, Bobo D, Davoudi H, Munoz O, Currat M, Abdi K, Biglari F, Craig O.E, Bradley D.G, Shennan S, Veeramah K.R, Mashkour M, Wegmann D, Hellentha G, Burger J, Early Neolithic genomes from the eastern Fertile Crescent, Science, 353, (6298), 2016, p499 - 503 Journal Article, 2016 URL DOI

Jones ER, Gonzalez-Fortes G, Connell S, Siska V, Eriksson A, Martiniano R, McLaughlin RL, Gallego Llorente M, Cassidy LM, Gamba C, Meshveliani T, Bar-Yosef O, Müller W, Belfer-Cohen A, Matskevich Z, Jakeli N, Higham TF, Currat M, Lordkipanidze D, Hofreiter M, Manica A, Pinhasi R, Bradley DG, Upper Palaeolithic genomes reveal deep roots of modern Eurasians., Nature communications, 6, 2015, p8912 Journal Article, 2015 DOI TARA - Full Text

Cassidy L.M, Ravinet M, Mori S, Kitano J, Are Japanese freshwater populations of threespine stickleback derived from the Pacific Ocean lineage?, Evolutionary Ecology Research, 15, (3), 2013, p295 - 311 Journal Article, 2013 URL