|
Absolute Expression Levels (transcripts per million)
| query | |
EEP |
MEP |
LEP |
ESP |
LSP |
|
25°C |
|
Cold shock (15°C) |
pH3 shock |
pH5.8 shock |
NaCl shock |
Bile shock |
Low Fe2+ shock |
Anaerobic shock |
|
Anaerobic growth |
Oxygen shock |
|
NonSPI2 |
InSPI2 |
InSPI2 LowMg2+ |
Peroxide shock (InSPI2) |
Nitric oxide shock (InSPI2) |
|
|
Common gene name |
Gene Synonym |
Type |
Start position (4/74) |
End position (4/74) |
Strand |
Product (EMBL DB) |
4-74 ID |
SL1344 Locus ID |
|---|
| ssaG | |
6 |
4 |
10 |
80 |
13 |
|
3 |
|
4 |
4 |
4 |
6 |
4 |
7 |
6 |
|
12 |
10 |
|
10 |
3,244 |
3,587 |
1,061 |
626 |
|
|
ssaG |
|
CDS |
1446389 |
1446604 |
+ |
Type III secretion system apparatus |
STM474_1412 |
SL1344_1340 |
|
 | | | | | | | | | |
view in JBrowse  : |  |
download data: | 
|
Relative Expression Levels (fold-change)
| query | |
EEP |
MEP |
LEP |
ESP |
LSP |
|
MEP |
Cold shock (15°C) |
pH3 shock |
pH5.8 shock |
NaCl shock |
Bile shock |
Low Fe2+ shock |
Anaerobic shock |
|
Anaerobic growth |
Oxygen shock |
|
InSPI2 |
InSPI2 LowMg2+ |
Peroxide shock (InSPI2) |
Nitric oxide shock (InSPI2) |
|
NonSPI2 |
InSPI2 |
|
Common gene name |
Gene Synonym |
Type |
Start position (4/74) |
End position (4/74) |
Strand |
Product (EMBL DB) |
4-74 ID |
SL1344 Locus ID |
|---|
| ssaG | |
1 |
1 |
1 |
7.98 |
1.31 |
|
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
|
1 |
0.87 |
|
1 |
1.11 |
0.33 |
0.19 |
|
1 |
319.92 |
|
ssaG |
|
CDS |
1446389 |
1446604 |
+ |
Type III secretion system apparatus |
STM474_1412 |
SL1344_1340 |
|
 | | | | | | | | | |
| download data: |
|
Protocols for Suite of 22 environmental conditions: Excel file, 408KB
Results provided by the Hinton Lab, automatically generated on Fri Sep 22 19:15:51 2023
We are very grateful to Joe Grissom and Tyrrell Conway for sharing the code that drives this compendium database, and was originally designed for use at GenExpDB.
|